STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_002208Glycerophosphoryl diester phosphodiesterase. (393 aa)    
Predicted Functional Partners:
Ccrd_026252
Phospholipase/carboxylesterase/thioesterase.
    
 0.927
Ccrd_007699
Phospholipase/carboxylesterase/thioesterase.
    
 0.927
Ccrd_009948
Phospholipase/carboxylesterase/thioesterase.
    
 0.927
Ccrd_025261
Choline/Ethanolamine kinase.
    
 0.918
Ccrd_022175
Choline/Ethanolamine kinase.
    
 0.918
Ccrd_022489
Uncharacterized protein.
     
 0.914
Ccrd_020432
Choline/Ethanolamine kinase.
    
 0.909
Ccrd_026760
DAO_C domain-containing protein.
  
 0.751
Ccrd_016650
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.751
Ccrd_013559
FAD dependent oxidoreductase.
    
 0.714
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.