STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_001025Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
Ccrd_018499
Transcription factor GRAS; Belongs to the GRAS family.
  
     0.538
Ccrd_004414
Uncharacterized protein.
  
     0.538
Ccrd_026045
Uncharacterized protein.
  
     0.537
Ccrd_002594
Polyketide cyclase/dehydrase.
  
     0.535
Ccrd_008979
Polyketide cyclase/dehydrase.
  
     0.535
Ccrd_008005
Polyketide cyclase/dehydrase.
  
     0.535
Ccrd_005328
Glycosyl-phosphatidyl inositol-anchored, plant.
  
  
 0.534
Ccrd_009390
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.533
Ccrd_008495
No apical meristem (NAM) protein.
  
     0.531
Ccrd_025108
Uncharacterized protein.
  
     0.530
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.