STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_023682Calreticulin/calnexin. (454 aa)    
Predicted Functional Partners:
Ccrd_016445
Heat shock protein Hsp90.
   
 
 0.881
Ccrd_008026
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.856
Ccrd_006196
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.856
Ccrd_002637
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.856
Ccrd_022377
Calreticulin.
   
0.831
Ccrd_022284
Calreticulin.
   
0.831
Ccrd_013767
Calreticulin.
   
0.831
Ccrd_022274
Calreticulin.
   
0.831
Ccrd_002236
Glycoside hydrolase, family 63.
    
 
 0.821
Ccrd_002799
Galactose mutarotase-like domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.787
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.