Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_002001 | Ccrd_005387 | A0A103XS82 | A0A103XKU8 | Photosystem II Psp29, biogenesis. | Photosystem II PsbO, manganese-stabilising. | 0.659 |
Ccrd_002001 | Ccrd_005634 | A0A103XS82 | A0A103XKA3 | Photosystem II Psp29, biogenesis. | Uncharacterized protein. | 0.538 |
Ccrd_002001 | Ccrd_012599 | A0A103XS82 | A0A118K5F0 | Photosystem II Psp29, biogenesis. | Photosystem II PsbO, manganese-stabilising. | 0.657 |
Ccrd_002001 | Ccrd_019577 | A0A103XS82 | A0A124SF52 | Photosystem II Psp29, biogenesis. | Uncharacterized protein. | 0.416 |
Ccrd_002001 | Ccrd_022592 | A0A103XS82 | A0A118JZB0 | Photosystem II Psp29, biogenesis. | Uncharacterized protein. | 0.464 |
Ccrd_002180 | Ccrd_005387 | A0A103XRX7 | A0A103XKU8 | Uncharacterized protein. | Photosystem II PsbO, manganese-stabilising. | 0.419 |
Ccrd_002180 | Ccrd_007603 | A0A103XRX7 | A0A103XGM2 | Uncharacterized protein. | TPM domain-containing protein. | 0.429 |
Ccrd_002180 | Ccrd_007961 | A0A103XRX7 | A0A103XFX0 | Uncharacterized protein. | Uncharacterized protein family Ycf49. | 0.480 |
Ccrd_002180 | Ccrd_012599 | A0A103XRX7 | A0A118K5F0 | Uncharacterized protein. | Photosystem II PsbO, manganese-stabilising. | 0.413 |
Ccrd_002180 | Ccrd_019577 | A0A103XRX7 | A0A124SF52 | Uncharacterized protein. | Uncharacterized protein. | 0.581 |
Ccrd_002180 | Ccrd_022592 | A0A103XRX7 | A0A118JZB0 | Uncharacterized protein. | Uncharacterized protein. | 0.419 |
Ccrd_005387 | Ccrd_002001 | A0A103XKU8 | A0A103XS82 | Photosystem II PsbO, manganese-stabilising. | Photosystem II Psp29, biogenesis. | 0.659 |
Ccrd_005387 | Ccrd_002180 | A0A103XKU8 | A0A103XRX7 | Photosystem II PsbO, manganese-stabilising. | Uncharacterized protein. | 0.419 |
Ccrd_005387 | Ccrd_005634 | A0A103XKU8 | A0A103XKA3 | Photosystem II PsbO, manganese-stabilising. | Uncharacterized protein. | 0.482 |
Ccrd_005387 | Ccrd_012599 | A0A103XKU8 | A0A118K5F0 | Photosystem II PsbO, manganese-stabilising. | Photosystem II PsbO, manganese-stabilising. | 0.900 |
Ccrd_005387 | Ccrd_017489 | A0A103XKU8 | A0A124SFS9 | Photosystem II PsbO, manganese-stabilising. | Photosystem II Psp29, biogenesis. | 0.662 |
Ccrd_005387 | Ccrd_019577 | A0A103XKU8 | A0A124SF52 | Photosystem II PsbO, manganese-stabilising. | Uncharacterized protein. | 0.470 |
Ccrd_005387 | Ccrd_022592 | A0A103XKU8 | A0A118JZB0 | Photosystem II PsbO, manganese-stabilising. | Uncharacterized protein. | 0.470 |
Ccrd_005634 | Ccrd_002001 | A0A103XKA3 | A0A103XS82 | Uncharacterized protein. | Photosystem II Psp29, biogenesis. | 0.538 |
Ccrd_005634 | Ccrd_005387 | A0A103XKA3 | A0A103XKU8 | Uncharacterized protein. | Photosystem II PsbO, manganese-stabilising. | 0.482 |
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