STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_020429Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (406 aa)    
Predicted Functional Partners:
Ccrd_012381
Nucleic acid-binding, OB-fold.
   
 
 0.532
Ccrd_022658
Ribosomal_L2_C domain-containing protein.
   
 
 0.437
Ccrd_019471
Nucleic acid-binding, OB-fold.
   
 
 0.437
Ccrd_004732
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
   0.423
Ccrd_003648
Ribosomal protein L14.
   
 
 0.411
Ccrd_017830
Ribosomal protein L14.
   
 
 0.411
Ccrd_012832
Uncharacterized protein.
   
 
 0.411
Ccrd_009223
Ribosomal protein L2 domain 2.
   
 
 0.411
Ccrd_014180
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.409
Ccrd_011956
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.409
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.