Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_007533 | Ccrd_019477 | A0A118JTV0 | A0A118K135 | Late embryogenesis abundant protein, LEA-3. | IQ motif, EF-hand binding site-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.420 |
Ccrd_011916 | Ccrd_019477 | A0A103YIF2 | A0A118K135 | Sec8 exocyst complex component specific domain-containing protein. | IQ motif, EF-hand binding site-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.456 |
Ccrd_019477 | Ccrd_007533 | A0A118K135 | A0A118JTV0 | IQ motif, EF-hand binding site-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Late embryogenesis abundant protein, LEA-3. | 0.420 |
Ccrd_019477 | Ccrd_011916 | A0A118K135 | A0A103YIF2 | IQ motif, EF-hand binding site-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Sec8 exocyst complex component specific domain-containing protein. | 0.456 |