STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_018752Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
Ccrd_015010
Uncharacterized protein.
  
     0.529
Ccrd_014904
Uncharacterized protein.
  
     0.523
Ccrd_005182
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.522
Ccrd_017182
Uncharacterized protein.
  
     0.519
Ccrd_012063
DUF4378 domain-containing protein.
  
     0.519
Ccrd_007761
Uncharacterized protein.
  
     0.518
Ccrd_002359
Uncharacterized protein.
  
     0.517
Ccrd_013439
Transcription factor MYC/MYB N-terminal.
  
     0.517
Ccrd_016713
Uncharacterized protein.
  
     0.516
Ccrd_018236
Uncharacterized protein.
  
     0.515
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.