STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_016949Ankyrin repeat-containing protein. (512 aa)    
Predicted Functional Partners:
Ccrd_006472
Ankyrin repeat-containing protein.
  
   
 0.633
Ccrd_012925
Band 4.1 domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.604
Ccrd_017266
Oleosin.
   
    0.594
Ccrd_005702
Ankyrin repeat-containing protein.
  
 
 
 0.555
Ccrd_013257
PUR-alpha/beta/gamma, DNA/RNA-binding.
      
 0.525
Ccrd_003504
Kelch-type beta propeller.
    
 0.485
Ccrd_017732
Kelch-type beta propeller.
    
 0.485
Ccrd_017031
Uncharacterized protein.
    
 0.485
Ccrd_009124
Serine/threonine-protein phosphatase.
    
 0.485
Ccrd_019948
Ankyrin repeat-containing protein.
  
     0.470
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.