STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_015501Uncharacterized protein. (451 aa)    
Predicted Functional Partners:
Ccrd_025263
Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
 
 0.966
Ccrd_008219
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.957
Ccrd_026809
Polyprenyl synthetase.
  
 0.953
Ccrd_004817
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_001365
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_020093
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_018893
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_018535
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_026812
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.953
Ccrd_003180
DUF3479 domain-containing protein.
 
  
 0.929
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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