STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_015091Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
Ccrd_007624
NAD(P)-binding domain-containing protein.
      
 0.554
Ccrd_005890
Mog1/PsbP, alpha/beta/alpha sandwich.
      
 0.524
Ccrd_005120
Cystinosin/ERS1p repeat-containing protein.
      
 0.524
Ccrd_019068
Uncharacterized protein.
      
 0.523
Ccrd_009965
Uncharacterized protein.
  
     0.489
Ccrd_010979
Uncharacterized protein.
  
   
 0.488
Ccrd_003991
Uncharacterized protein.
  
     0.487
Ccrd_017383
Uncharacterized protein.
  
     0.482
Ccrd_006962
Uncharacterized protein.
  
     0.475
Ccrd_018565
Uncharacterized protein.
  
     0.471
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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