Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_000534 | Ccrd_000826 | A0A118JXR0 | A0A118JXY1 | F-box domain, cyclin-like protein. | E3 ubiquitin protein ligase. | 0.687 |
Ccrd_000534 | Ccrd_005383 | A0A118JXR0 | A0A118JUT4 | F-box domain, cyclin-like protein. | Post-SET domain-containing protein. | 0.958 |
Ccrd_000534 | Ccrd_005483 | A0A118JXR0 | A0A103XKI4 | F-box domain, cyclin-like protein. | RNA polymerase II accessory factor, Cdc73. | 0.662 |
Ccrd_000534 | Ccrd_011904 | A0A118JXR0 | A0A118K5W1 | F-box domain, cyclin-like protein. | JmjC domain-containing protein. | 0.950 |
Ccrd_000534 | Ccrd_014179 | A0A118JXR0 | A0A118K4G1 | F-box domain, cyclin-like protein. | Uncharacterized protein. | 0.717 |
Ccrd_000534 | Ccrd_015864 | A0A118JXR0 | A0A103YB29 | F-box domain, cyclin-like protein. | Tetratricopeptide-like helical. | 0.704 |
Ccrd_000534 | Ccrd_017364 | A0A118JXR0 | A0A118K2G1 | F-box domain, cyclin-like protein. | Helicase, C-terminal. | 0.679 |
Ccrd_000534 | Ccrd_019816 | A0A118JXR0 | A0A103Y3K4 | F-box domain, cyclin-like protein. | DNA-directed RNA polymerase, 30-40kDa subunit, conserved site-containing protein. | 0.888 |
Ccrd_000826 | Ccrd_000534 | A0A118JXY1 | A0A118JXR0 | E3 ubiquitin protein ligase. | F-box domain, cyclin-like protein. | 0.687 |
Ccrd_000826 | Ccrd_005383 | A0A118JXY1 | A0A118JUT4 | E3 ubiquitin protein ligase. | Post-SET domain-containing protein. | 0.571 |
Ccrd_000826 | Ccrd_005483 | A0A118JXY1 | A0A103XKI4 | E3 ubiquitin protein ligase. | RNA polymerase II accessory factor, Cdc73. | 0.958 |
Ccrd_000826 | Ccrd_013530 | A0A118JXY1 | A0A118K4U8 | E3 ubiquitin protein ligase. | Plus-3. | 0.778 |
Ccrd_000826 | Ccrd_014179 | A0A118JXY1 | A0A118K4G1 | E3 ubiquitin protein ligase. | Uncharacterized protein. | 0.717 |
Ccrd_000826 | Ccrd_015864 | A0A118JXY1 | A0A103YB29 | E3 ubiquitin protein ligase. | Tetratricopeptide-like helical. | 0.909 |
Ccrd_000826 | Ccrd_017364 | A0A118JXY1 | A0A118K2G1 | E3 ubiquitin protein ligase. | Helicase, C-terminal. | 0.494 |
Ccrd_000826 | Ccrd_019816 | A0A118JXY1 | A0A103Y3K4 | E3 ubiquitin protein ligase. | DNA-directed RNA polymerase, 30-40kDa subunit, conserved site-containing protein. | 0.432 |
Ccrd_005383 | Ccrd_000534 | A0A118JUT4 | A0A118JXR0 | Post-SET domain-containing protein. | F-box domain, cyclin-like protein. | 0.958 |
Ccrd_005383 | Ccrd_000826 | A0A118JUT4 | A0A118JXY1 | Post-SET domain-containing protein. | E3 ubiquitin protein ligase. | 0.571 |
Ccrd_005383 | Ccrd_011904 | A0A118JUT4 | A0A118K5W1 | Post-SET domain-containing protein. | JmjC domain-containing protein. | 0.898 |
Ccrd_005383 | Ccrd_012262 | A0A118JUT4 | A0A118K5N0 | Post-SET domain-containing protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.423 |
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