STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_012765Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein. (95 aa)    
Predicted Functional Partners:
Ccrd_009568
Uncharacterized protein.
  
     0.541
Ccrd_011384
Uncharacterized protein.
  
     0.540
Ccrd_019094
Uncharacterized protein.
  
     0.534
Ccrd_023950
Uncharacterized protein.
  
     0.533
Ccrd_016978
Heavy metal-associated domain, HMA.
  
     0.532
Ccrd_021052
Uncharacterized protein.
  
     0.531
Ccrd_019426
B-cell receptor-associated 31-like protein.
  
     0.531
Ccrd_000136
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.530
Ccrd_019424
B-cell receptor-associated 31-like protein.
  
     0.530
Ccrd_010831
HAD-like domain-containing protein.
  
     0.530
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.