STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_010568Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
Ccrd_005483
RNA polymerase II accessory factor, Cdc73.
    
 0.730
Ccrd_005599
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.727
Ccrd_000956
Anaphase-promoting complex subunit 4.
    
 0.725
Ccrd_005047
Anaphase-promoting complex subunit 11.
    
 0.717
Ccrd_016144
Uncharacterized protein.
  
 
 0.696
Ccrd_017364
Helicase, C-terminal.
    
 0.666
Ccrd_006448
Tetratricopeptide-like helical.
    
 0.665
Ccrd_020892
Cellulose synthase.
 
 0.649
Ccrd_011072
Tetratricopeptide-like helical.
    
 0.643
Ccrd_011071
Tetratricopeptide-like helical.
    
 0.643
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.