STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_010203Barwin-like endoglucanase. (146 aa)    
Predicted Functional Partners:
Ccrd_003723
Jas domain-containing protein.
   
    0.594
Ccrd_014870
Uncharacterized protein.
  
     0.469
Ccrd_001407
Uncharacterized protein.
  
     0.468
Ccrd_022485
Actin-binding FH2.
  
     0.446
Ccrd_015022
Uncharacterized protein.
  
     0.446
Ccrd_024684
Uncharacterized protein.
  
     0.442
Ccrd_022800
Uncharacterized protein.
  
     0.438
Ccrd_021380
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.436
Ccrd_025820
Uncharacterized protein.
  
     0.432
Ccrd_025465
Uncharacterized protein.
  
     0.430
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.