STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_0095812S globulin. (619 aa)    
Predicted Functional Partners:
Ccrd_016422
Signal peptidase I.
   
 
 0.619
Ccrd_015635
Uncharacterized protein.
   
 
 0.619
Ccrd_021772
HECT-like protein.
      
 0.558
Ccrd_021771
Armadillo-like helical.
      
 0.558
Ccrd_004718
G-protein, beta subunit.
    
 0.530
Ccrd_018737
Uncharacterized protein.
  
     0.522
Ccrd_025313
Barwin-like endoglucanase.
  
     0.521
Ccrd_005299
Uncharacterized protein.
  
     0.521
Ccrd_006863
Barwin-like endoglucanase.
  
     0.516
Ccrd_001804
Bet v I domain-containing protein.
  
     0.515
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.