STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_024662Leucine-rich repeat-containing protein. (436 aa)    
Predicted Functional Partners:
Ccrd_026843
Uncharacterized protein.
  
 
  0.495
Ccrd_001051
Leucine rich repeat 4.
  
 
   0.476
Ccrd_015970
Leucine-rich repeat-containing protein.
  
     0.462
Ccrd_023290
Leucine-rich repeat-containing protein.
  
     0.456
Ccrd_016631
Uncharacterized protein.
  
     0.455
Ccrd_024599
Leucine-rich repeat-containing protein.
  
     0.451
Ccrd_019396
Leucine-rich repeat-containing protein.
  
     0.447
Ccrd_016643
Leucine-rich repeat-containing protein.
  
     0.434
Ccrd_009749
Leucine-rich repeat-containing protein.
  
     0.432
Ccrd_013831
Leucine-rich repeat-containing protein.
  
     0.416
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.