STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_007976Maspardin. (438 aa)    
Predicted Functional Partners:
Ccrd_016612
Uncharacterized protein.
      
 0.668
Ccrd_016613
Spatacsin_C domain-containing protein.
      
 0.668
Ccrd_006555
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.525
Ccrd_002316
Uncharacterized protein.
      
 0.524
Ccrd_026336
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
      
 0.523
Ccrd_005674
Senescence domain-containing protein.
      
 0.522
Ccrd_001892
Senescence/spartin-associated.
      
 0.522
Ccrd_017608
Senescence/spartin-associated.
      
 0.522
Ccrd_019265
ATP12, ATPase F1F0-assembly protein.
   
   0.507
Ccrd_001722
PHB domain-containing protein.
   
  
 0.401
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.