STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_007700CRC domain-containing protein. (251 aa)    
Predicted Functional Partners:
Ccrd_002187
Cyclin-like protein.
   
 0.840
Ccrd_008131
DIRP-like protein.
   
 0.828
Ccrd_010492
HTH myb-type domain-containing protein.
   
 0.828
Ccrd_007599
Transcription factor DP.
   
 0.635
Ccrd_012120
DP domain-containing protein.
   
 0.635
Ccrd_021800
Transcription factor DP; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
   
 0.635
Ccrd_007390
Uncharacterized protein.
   
 0.614
Ccrd_007391
E2F Family.
   
 0.614
Ccrd_013871
E2F Family.
   
 0.614
Ccrd_026664
Uncharacterized protein.
   
 0.607
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.