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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_004952Non-heme dioxygenase N-terminal domain-containing protein. (940 aa)    
Predicted Functional Partners:
Ccrd_006699
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.940
Ccrd_016916
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.940
Ccrd_021915
Non-heme dioxygenase N-terminal domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.903
Ccrd_023770
Non-heme dioxygenase N-terminal domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.901
Ccrd_003437
Non-heme dioxygenase N-terminal domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.772
Ccrd_008329
Non-heme dioxygenase N-terminal domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.769
Ccrd_004831
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.758
Ccrd_019589
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.756
Ccrd_011041
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.754
Ccrd_013768
Phosphatidylethanolamine-binding protein PEBP.
      
 0.739
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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