STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_002723Polyketide cyclase/dehydrase. (264 aa)    
Predicted Functional Partners:
Ccrd_015787
Protein phosphatase 2C.
    
 0.850
Ccrd_020196
PPM-type phosphatase domain-containing protein.
    
 0.850
Ccrd_003282
Protein phosphatase 2C.
    
 0.827
Ccrd_011750
Protein phosphatase 2C.
    
 0.827
Ccrd_014666
Protein phosphatase 2C.
    
 0.827
Ccrd_009647
Protein phosphatase 2C.
    
 0.827
Ccrd_016914
Protein phosphatase 2C.
    
 0.735
Ccrd_014534
Protein phosphatase 2C.
    
 0.694
Ccrd_005025
Protein phosphatase 2C.
    
 
 0.589
Ccrd_023847
PPM-type phosphatase domain-containing protein.
    
 
 0.589
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.