STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_001993PGG domain-containing protein. (299 aa)    
Predicted Functional Partners:
Ccrd_012925
Band 4.1 domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.604
Ccrd_004166
SPX domain-containing protein.
    
 0.557
Ccrd_020420
SPX, N-terminal.
    
 0.557
Ccrd_015631
SPX, N-terminal.
    
 0.557
Ccrd_003504
Kelch-type beta propeller.
    
 0.485
Ccrd_017732
Kelch-type beta propeller.
    
 0.485
Ccrd_017031
Uncharacterized protein.
    
 0.485
Ccrd_009124
Serine/threonine-protein phosphatase.
    
 0.485
Ccrd_023041
Plant organelle RNA recognition domain-containing protein.
  
 
  0.411
Ccrd_015888
Uncharacterized protein.
  
     0.405
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.