Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccrd_000343Concanavalin A-like lectin/glucanase, subgroup. (951 aa)    
Predicted Functional Partners:
Ccrd_015844
Uncharacterized protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
  
 
0.911
Ccrd_002607
Nucleoside diphosphate kinase.
    
  0.910
Ccrd_015437
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
  0.910
Ccrd_021214
Nucleoside diphosphate kinase.
    
  0.910
Ccrd_015589
Cation-transporting P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
    
 0.909
Ccrd_011141
Concanavalin A-like lectin/glucanase, subgroup; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
  
 
0.903
Ccrd_002304
Concanavalin A-like lectin/glucanase, subgroup.
  
  
 
0.901
Ccrd_007329
Aquaporin-like protein; Belongs to the GDA1/CD39 NTPase family.
     
  0.900
Ccrd_001763
Nucleoside phosphatase GDA1/CD39; Belongs to the GDA1/CD39 NTPase family.
     
  0.900
Ccrd_000241
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
     
  0.900
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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