STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_023745Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
Ccrd_014376
Acetyl-CoA carboxylase, central domain-containing protein.
   
  
 0.548
Ccrd_025924
Cytochrome b5, heme-binding site-containing protein.
    
 
 0.459
Ccrd_025680
Eukaryotic molybdopterin oxidoreductase.
    
 
 0.459
Ccrd_025681
Cytochrome b5, heme-binding site-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.459
Ccrd_025678
Oxidoreductase, molybdopterin-binding domain-containing protein.
    
 
 0.459
Ccrd_025679
Cytochrome b5-like heme/steroid binding domain-containing protein.
    
 
 0.459
Ccrd_025682
Cytochrome b5-like heme/steroid binding domain-containing protein.
    
 
 0.459
Ccrd_020304
Homeodomain-like protein.
   
    0.418
Ccrd_019839
Homeodomain-containing protein.
   
    0.418
Ccrd_012625
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.416
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.