STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_021704HAD-like domain-containing protein. (391 aa)    
Predicted Functional Partners:
Ccrd_010562
Membrane transporter, Tim44-related/Ribosomal protein L45.
   
 0.904
Ccrd_003637
Uncharacterized protein.
   
 0.845
Ccrd_022404
Glycosyl transferase, family 1; Belongs to the glycosyltransferase 1 family.
  
 0.742
Ccrd_004942
Cytochrome c oxidase, subunit Vb.
   
 0.736
Ccrd_015646
Cytochrome c oxidase, subunit Vb.
   
 0.736
Ccrd_013374
Sucrose-phosphate synthase.
  
 0.728
Ccrd_007729
Sucrose_synth domain-containing protein.
  
 0.718
Ccrd_001673
Chaperonin Cpn10; Belongs to the GroES chaperonin family.
  
 
 0.715
Ccrd_000672
Chaperonin Cpn10; Belongs to the GroES chaperonin family.
  
 
 0.715
Ccrd_021262
Chaperonin 21, chloroplast; Belongs to the GroES chaperonin family.
  
 
 0.715
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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