STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_019852Inorganic pyrophosphatase. (296 aa)    
Predicted Functional Partners:
Ccrd_012805
Inorganic pyrophosphatase.
  
  
 
0.913
Ccrd_007460
Uncharacterized protein.
  
  
 
0.911
Ccrd_007670
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.786
Ccrd_000566
Uncharacterized protein.
   
 
 0.785
Ccrd_023191
ATPase, F1 complex, OSCP/delta subunit.
   
 
 0.785
Ccrd_021069
Uncharacterized protein.
   
 
 0.785
Ccrd_022198
ATPase, F1 complex, OSCP/delta subunit.
   
 
 0.785
Ccrd_001929
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
 
 0.772
Ccrd_005650
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
 
 0.772
Ccrd_023206
ATPase, F1 complex, gamma subunit.
   
 
 0.760
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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