STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_014024AAA+ ATPase domain-containing protein. (943 aa)    
Predicted Functional Partners:
Ccrd_020632
SEP domain-containing protein.
   
 0.717
Ccrd_015313
Peroxisomal membrane protein 14.
    
 0.715
Ccrd_022627
Ovarian tumor, otubain.
    
 0.713
Ccrd_016563
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.709
Ccrd_017772
Nuclear pore localization protein NPL4.
    
 0.707
Ccrd_017729
Nuclear pore localization protein NPL4.
    
 0.707
Ccrd_010068
Machado-Joseph disease protein MJD.
   
 0.703
Ccrd_021239
Mannose-6-phosphate receptor binding domain-containing protein.
    
 0.703
Ccrd_017066
Peroxin-3.
     
 0.668
Ccrd_024195
Thioredoxin-like fold.
    
 0.664
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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