STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_011320DNA-binding WRKY. (690 aa)    
Predicted Functional Partners:
Ccrd_004786
DNA-binding WRKY.
  
  
 
0.905
Ccrd_022546
DNA-binding WRKY.
  
  
 
0.903
Ccrd_008014
Bromodomain-containing protein.
    
 
 0.529
Ccrd_024513
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.499
Ccrd_016303
VQ-like protein.
  
 
 
 0.482
Ccrd_012991
Zinc finger, Dof-type.
  
     0.444
Ccrd_007163
Uncharacterized protein.
  
     0.440
Ccrd_018611
Zinc finger, Dof-type.
  
     0.437
Ccrd_008620
CO/COL/TOC1, conserved site-containing protein.
  
     0.427
Ccrd_021524
Uncharacterized protein.
  
     0.427
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.