STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_010825EF-hand-like domain-containing protein. (552 aa)    
Predicted Functional Partners:
Ccrd_001469
Concanavalin A-like lectin/glucanase, subgroup; Belongs to the protein kinase superfamily.
  
 
  0.500
Ccrd_007061
Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
  
 
  0.490
Ccrd_020267
Protein kinase, catalytic domain-containing protein.
  
 
  0.489
Ccrd_015318
Protein kinase, catalytic domain-containing protein.
  
 
  0.487
Ccrd_005963
Concanavalin A-like lectin/glucanase, subgroup.
  
 
  0.486
Ccrd_008941
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.484
Ccrd_010873
Protein kinase domain-containing protein.
  
 
  0.479
Ccrd_022657
Concanavalin A-like lectin/glucanase, subgroup.
  
 
  0.478
Ccrd_005339
Concanavalin A-like lectin/glucanase, subgroup.
  
 
  0.476
Ccrd_000641
Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.476
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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