STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009433Glutathione S-transferase/chloride channel, C-terminal; Belongs to the GST superfamily. (205 aa)    
Predicted Functional Partners:
Ccrd_009701
GCR1-cAMP receptor.
      
 0.699
Ccrd_020965
Uncharacterized protein.
   
   0.478
Ccrd_006558
NADH:ubiquinone oxidoreductase-like, 20kDa subunit.
    
   0.455
Ccrd_007833
Uncharacterized protein.
    
   0.454
Ccrd_017849
NAD(P)-binding domain-containing protein.
   
   0.447
Ccrd_017367
NADH-ubiquinone oxidoreductase, subunit 10.
    
   0.446
Ccrd_005511
NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial.
    
   0.439
Ccrd_017411
Uncharacterized protein.
    
   0.439
Ccrd_014080
Zinc finger, CHCC-type.
    
   0.439
Ccrd_010237
Uncharacterized protein.
    
   0.439
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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