STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009066Drought induced 19/ RING finger protein 114. (191 aa)    
Predicted Functional Partners:
Ccrd_014918
Uncharacterized protein.
  
     0.523
Ccrd_011576
Nucleotide-diphospho-sugar transferase.
  
     0.522
Ccrd_024286
Lateral Root Primordium type 1, C-terminal.
  
     0.516
Ccrd_024869
Ribosomal_L18_c domain-containing protein.
  
     0.497
Ccrd_010202
Heavy metal-associated domain, HMA.
  
     0.496
Ccrd_000213
Uncharacterized protein family Cys-rich.
  
     0.491
Ccrd_014351
Uncharacterized protein.
  
     0.483
Ccrd_007454
Uncharacterized protein.
  
     0.481
Ccrd_017619
Heavy metal-associated domain, HMA.
  
     0.477
Ccrd_010429
Protein kinase domain-containing protein.
  
     0.475
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.