Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM0034Conserved hypothetical protein; Alternative locus ID: PMED4_00331. (65 aa)    
Predicted Functional Partners:
PMM0033
Conserved hypothetical protein; Alternative locus ID: PMED4_00321.
       0.566
PMM0073
ABC transporter, membrane component; Alternative locus ID: PMED4_00751.
   
  
 0.516
PMM0085
Putative potassium channel, VIC family; Alternative locus ID: PMED4_00881.
   
  
 0.516
PMM0002
Conserved hypothetical protein; Alternative locus ID: PMED4_00011.
      
 0.499
PMM0007
Conserved hypothetical protein; Alternative locus ID: PMED4_00061.
      
 0.499
PMM0020
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
      
 0.499
PMM0041
Possible reductase; Alternative locus ID: PMED4_00411.
      
 0.499
PMM0058
Conserved hypothetical protein; Alternative locus ID: PMED4_00601.
      
 0.499
PMM0083
Putative sodium/sulfate transporter, DASS family; Alternative locus ID: PMED4_00861.
      
 0.499
PMM0084
Possible sodium transporter, Trk family; Alternative locus ID: PMED4_00871.
      
 0.499
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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