Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
PMM0041Possible reductase; Alternative locus ID: PMED4_00411. (174 aa)    
Predicted Functional Partners:
PMM0042
Flavoprotein; Alternative locus ID: PMED4_00421.
  
  
 0.821
PMM0043
Flavoprotein; Alternative locus ID: PMED4_00431.
       0.808
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.584
PMM0082
Putative NADH dehydrogenase, transport associated; Alternative locus ID: PMED4_00851.
  
   
 0.578
PMM0083
Putative sodium/sulfate transporter, DASS family; Alternative locus ID: PMED4_00861.
   
  
 0.502
PMM0370
Putative cyanate ABC transporter, substrate binding protein; Alternative locus ID: PMED4_04031.
 
  
 0.502
PMM0002
Conserved hypothetical protein; Alternative locus ID: PMED4_00011.
      
 0.499
PMM0007
Conserved hypothetical protein; Alternative locus ID: PMED4_00061.
      
 0.499
PMM0020
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
      
 0.499
PMM0034
Conserved hypothetical protein; Alternative locus ID: PMED4_00331.
      
 0.499
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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