Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PMM0063Conserved hypothetical protein; Alternative locus ID: PMED4_00651. (310 aa)    
Predicted Functional Partners:
PMM0146
Conserved hypothetical protein; Alternative locus ID: PMED4_01521.
  
    0.776
PMM0833
Conserved hypothetical protein; Alternative locus ID: PMED4_09271.
  
     0.774
hli3
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_16921.
  
     0.763
PMM0058
Conserved hypothetical protein; Alternative locus ID: PMED4_00601.
  
     0.759
PMM0845
Conserved hypothetical protein; Alternative locus ID: PMED4_09401.
  
     0.745
PMM0438
Conserved hypothetical protein; Alternative locus ID: PMED4_04851.
  
     0.743
PMM0239
Conserved hypothetical protein; Alternative locus ID: PMED4_02441.
  
     0.737
PMM1676
Conserved hypothetical protein; Alternative locus ID: PMED4_18861.
  
    0.727
psbI
Photosystem II reaction center PsbI protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
  
     0.721
PMM1272
Conserved hypothetical protein; Alternative locus ID: PMED4_14381.
  
    0.718
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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