Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PMM0075Conserved hypothetical protein; Alternative locus ID: PMED4_00771. (368 aa)    
Predicted Functional Partners:
PMM1803
Membrane protein; Alternative locus ID: PMED4_00781.
       0.785
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
    0.764
PMM1583
Conserved hypothetical protein; Alternative locus ID: PMED4_17931.
  
     0.764
PMM0953
Conserved hypothetical protein; Alternative locus ID: PMED4_10631.
  
    0.761
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.756
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.755
PMM1480
Conserved hypothetical protein; Alternative locus ID: PMED4_16891.
  
     0.729
PMM1647
Conserved hypothetical protein; Alternative locus ID: PMED4_18571.
  
     0.722
cytM
Cytochrome cM; Alternative locus ID: PMED4_12031.
  
     0.706
pgm
Phosphoglucomutase; Alternative locus ID: PMED4_00791.
       0.701
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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