Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0084Possible sodium transporter, Trk family; Alternative locus ID: PMED4_00871. (467 aa)    
Predicted Functional Partners:
PMM0085
Putative potassium channel, VIC family; Alternative locus ID: PMED4_00881.
 
 0.996
PMM0083
Putative sodium/sulfate transporter, DASS family; Alternative locus ID: PMED4_00861.
  
  
 0.913
PMM0082
Putative NADH dehydrogenase, transport associated; Alternative locus ID: PMED4_00851.
     
 0.827
PMM0704
Putative potassium channel, VIC family; Alternative locus ID: PMED4_07781.
  
 
 0.802
PMM0080
Conserved hypothetical protein; Alternative locus ID: PMED4_00831.
  
  
 0.617
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
       0.535
purL
Phosphoribosylformylglycinamidine synthetase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assis [...]
  
  
 0.516
PMM0002
Conserved hypothetical protein; Alternative locus ID: PMED4_00011.
   
  
 0.502
PMM0007
Conserved hypothetical protein; Alternative locus ID: PMED4_00061.
      
 0.499
PMM0020
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
      
 0.499
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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