STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hli1Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_00981. (48 aa)    
Predicted Functional Partners:
PMM0092
Conserved hypothetical protein; Alternative locus ID: PMED4_00971.
  
    0.683
PMM0091
Conserved hypothetical protein; Alternative locus ID: PMED4_00961.
  
    0.556
hli10
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_15861.
   
  
 0.501
hli21
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_07551.
   
  
 0.499
hli17
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_09091.
   
  
 0.499
hli22
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bahya, D. et al. 2002. Analysis of the hli gene family in marine and freshwater cyanobacteria FEMS Microbiol Lett In Press; Alternative locus ID: PMED4_07541.
   
  
 0.495
hli7
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_15951.
      
 0.495
hli5
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_16051.
   
  
 0.493
PMM0090
Possible serine protease; Alternative locus ID: PMED4_00951.
       0.462
hli2
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_00661.
   
  
 0.405
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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