STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0139Conserved hypothetical protein; Alternative locus ID: PMED4_01451. (216 aa)    
Predicted Functional Partners:
tsaD
Probable o-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.975
PMM1626
Conserved hypothetical protein; Alternative locus ID: PMED4_18361.
  
 
 0.954
ycf34
Putative Ycf34; Alternative locus ID: PMED4_01461.
  
    0.835
PMM1047
Conserved hypothetical protein; Alternative locus ID: PMED4_11931.
 
    0.776
PMM0099
Conserved hypothetical protein; Alternative locus ID: PMED4_01041.
  
    0.774
PMM1563
Conserved hypothetical protein; Alternative locus ID: PMED4_17731.
  
    0.768
PMM0795
Conserved hypothetical protein; Alternative locus ID: PMED4_08811.
  
     0.759
PMM0589
Conserved hypothetical; Alternative locus ID: PMED4_06381.
  
     0.758
PMM1583
Conserved hypothetical protein; Alternative locus ID: PMED4_17931.
  
    0.756
PMM0836
Conserved hypothetical protein; Alternative locus ID: PMED4_09301.
  
    0.752
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.