STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menA1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily. (305 aa)    
Predicted Functional Partners:
PMM0082
Putative NADH dehydrogenase, transport associated; Alternative locus ID: PMED4_00851.
  
 
  0.904
menE
Probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase); Alternative locus ID: PMED4_01801.
 
  
 0.877
sds
Polyprenyl synthetase; Alternative locus ID: PMED4_06671; Belongs to the FPP/GGPP synthase family.
 
 
 0.859
menC
Putative O-succinylbenzoate synthase; Alternative locus ID: PMED4_01811; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 0.852
chlP
Aromatic-ring hydroxylase (flavoprotein monooxygenase); Alternative locus ID: PMED4_08451.
    
 0.805
menF
Isochorismate synthase; Alternative locus ID: PMED4_01831.
 
  
 0.798
PMM0667
Conserved hypothetical protein; Alternative locus ID: PMED4_07231.
  
    0.726
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
     0.721
PMM1440
Conserved hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.688
PMM0886
Conserved hypothetical protein; Alternative locus ID: PMED4_09971.
  
    0.679
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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