Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0192ABC transporter, ATP binding component, possibly for oligopeptides; Alternative locus ID: PMED4_01981. (531 aa)    
Predicted Functional Partners:
PMM0421
Putative ABC transporter, oligopeptides; Alternative locus ID: PMED4_04651.
 0.999
PMM1048
Putative ABC transporter, oligopeptides; Alternative locus ID: PMED4_11941.
 0.999
PMM1049
ABC transporter, substrate binding protein, possibly oligopeptides; Alternative locus ID: PMED4_11951.
 
 0.989
PMM0392
Possible cobalt transport protein; Alternative locus ID: PMED4_04331.
  
 
 0.899
PMM0913
Possible ABC transporter; Alternative locus ID: PMED4_10241.
 
 
    0.650
spoT
Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.646
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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