Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PMM0247Conserved hypothetical protein; Alternative locus ID: PMED4_02521. (323 aa)    
Predicted Functional Partners:
PMM0248
Conserved hypothetical protein; Alternative locus ID: PMED4_02531.
 
    0.958
PMM1386
Possible permease; Alternative locus ID: PMED4_15811.
 
     0.775
PMM1338
Chloroplast outer envelope membrane protein homolog; Alternative locus ID: PMED4_15061.
  
     0.756
PMM0059
Conserved hypothetical protein; Alternative locus ID: PMED4_00611.
 
     0.747
PMM0764
Possible ABC transporter, ATP binding component; Alternative locus ID: PMED4_08491.
 
     0.712
PMM1586
Conserved hypothetical protein; Alternative locus ID: PMED4_17961.
  
     0.705
PMM0118
Conserved hypothetical protein; Alternative locus ID: PMED4_01241.
  
    0.690
ntcA
Global nitrogen regulatory protein, CRP family of transcriptional regulators; Alternative locus ID: PMED4_02511.
       0.682
PMM0097
Possible RND family outer membrane efflux protein; Alternative locus ID: PMED4_01021.
  
     0.674
PMM1197
Conserved hypothetical protein; Alternative locus ID: PMED4_13621.
  
     0.653
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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