Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0273Probable oxidoreductase; Alternative locus ID: PMED4_02781. (334 aa)    
Predicted Functional Partners:
PMM0274
Conserved hypothetical protein; Alternative locus ID: PMED4_02791.
 
    0.753
PMM0782
Putative oxidoreductase; Alternative locus ID: PMED4_08681.
  
     0.736
PMM1259
Pyridoxal-phosphate-dependent aminotransferase; Alternative locus ID: PMED4_14251; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.697
lysS
Lysyl-tRNA synthetase; Alternative locus ID: PMED4_18281; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.652
degT
Putative pleiotropic regulatory protein; Members of the DegT/DnrJ/EryC1/StrS family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions; Alternative locus ID: PMED4_02891; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.629
lpxB
Lipid-A-disaccharide synthetase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.628
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.504
PMM0276
Conserved hypothetical protein; Alternative locus ID: PMED4_02811.
       0.501
PMM1258
Pyridoxal-phosphate-dependent aminotransferase; Alternative locus ID: PMED4_14241; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.472
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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