STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0283Conserved hypothetical protein; Alternative locus ID: PMED4_02881. (197 aa)    
Predicted Functional Partners:
pgk,
Phosphoglycerate kinase; Alternative locus ID: PMED4_02011; Belongs to the phosphoglycerate kinase family.
 
 
    0.854
degT
Putative pleiotropic regulatory protein; Members of the DegT/DnrJ/EryC1/StrS family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions; Alternative locus ID: PMED4_02891; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.702
fabI
Enoyl-[acyl-carrier-protein] reductase; Alternative locus ID: PMED4_02871.
  
    0.655
hisB
Imidazoleglycerol-phosphate dehydratase; Alternative locus ID: PMED4_02861.
  
    0.637
PMM1150
Putative thioredoxin reductase; Alternative locus ID: PMED4_13081.
  
 
 0.520
PMM0043
Flavoprotein; Alternative locus ID: PMED4_00431.
  
  
 0.483
PMM0280
Retinal pigment epithelial membrane protein; Alternative locus ID: PMED4_02851.
  
    0.455
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.