STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0289Possible ABC transporter; Alternative locus ID: PMED4_02941. (281 aa)    
Predicted Functional Partners:
PMM0290
Possible ABC transporter, ATP binding component; Alternative locus ID: PMED4_02951.
 
 0.997
PMM1324
Possible transporter, membrane component; Alternative locus ID: PMED4_14921.
 
 0.995
PMM1287
Conserved hypothetical protein; Alternative locus ID: PMED4_14531.
  
  
 0.767
PMM0589
Conserved hypothetical; Alternative locus ID: PMED4_06381.
 
   
 0.754
PMM1473
Conserved hypothetical protein; Alternative locus ID: PMED4_16821.
  
     0.681
ndhN
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
    0.664
PMM0352
Abortive infection protein; Alternative locus ID: PMED4_03711.
  
     0.654
PMM0291
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
    0.641
PMM1604
Conserved hypothetical protein; Alternative locus ID: PMED4_18141.
  
     0.622
PMM0886
Conserved hypothetical protein; Alternative locus ID: PMED4_09971.
  
     0.621
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.