Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0310Carbohydrate kinase, FGGY family; Alternative locus ID: PMED4_03161. (409 aa)    
Predicted Functional Partners:
rpe,
Ribulose-phosphate 3-epimerase; Alternative locus ID: PMED4_08511.
    
 0.935
gnd
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.855
rpiA,
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.836
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.827
PMM0555
Putative carboxysome peptide B; Alternative locus ID: PMED4_06041.
  
     0.746
csoS3
Carboxysome shell protein CsoS3; Alternative locus ID: PMED4_06021.
  
    0.741
PMM0554
Putative carboxysome peptide A; Alternative locus ID: PMED4_06031.
  
     0.741
csoS2
Carboxysome shell protein CsoS2; Alternative locus ID: PMED4_06011.
  
     0.734
PMM0547
Conserved hypothetical protein; Alternative locus ID: PMED4_05961.
  
     0.718
invA
Putative neutral invertase-like protein; Alternative locus ID: PMED4_03341.
  
   0.640
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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