Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM0332Possible Rhomboid family; Alternative locus ID: PMED4_03391. (197 aa)    
Predicted Functional Partners:
PMM0616
Cell wall hydrolase/autolysin; Alternative locus ID: PMED4_06651.
   
   0.759
phb
Band 7 protein; Alternative locus ID: PMED4_05311.
   
 0.636
PMM0331
Putative aldehyde dehydrogenase; Alternative locus ID: PMED4_03381; Belongs to the aldehyde dehydrogenase family.
  
   0.547
rimI
GCN5-related N-acetyltransferase; Alternative locus ID: PMED4_03401.
  
    0.545
tatA
mttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.497
tatA-2
mttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.497
PMM1053
Conserved hypothetical protein; Alternative locus ID: PMED4_11991; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
  
 0.476
PMM0330
Possible LysM domain; Alternative locus ID: PMED4_03371.
       0.412
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.