STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0346Conserved hypothetical protein; Alternative locus ID: PMED4_03631. (99 aa)    
Predicted Functional Partners:
PMM1195
Conserved hypothetical protein; Alternative locus ID: PMED4_13601.
  
     0.747
PMM0670
Conserved hypothetical protein; Alternative locus ID: PMED4_07261.
  
    0.740
som-3
Possible porin; Alternative locus ID: PMED4_12671.
  
    0.728
PMM1109
Conserved hypothetical protein; Alternative locus ID: PMED4_12551.
  
     0.723
PMM0478
Conserved hypothetical protein; Alternative locus ID: PMED4_05261.
  
    0.636
PMM0345
Putative bacterioferritin comigratory protein; Possible thiol peroxidase; Alternative locus ID: PMED4_03621.
       0.628
PMM0588
Conserved hypothetical protein; Alternative locus ID: PMED4_06371.
  
     0.588
PMM1326
Conserved hypothetical protein; Alternative locus ID: PMED4_14941.
  
    0.578
PMM0488
Conserved hypothetical protein; Alternative locus ID: PMED4_05371.
  
     0.572
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
  
    0.562
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.