Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PMM0403Conserved hypothetical protein; Alternative locus ID: PMED4_04441. (148 aa)    
Predicted Functional Partners:
fadD
Putative long-chain-fatty-acid--CoA ligase; Alternative locus ID: PMED4_04431.
      0.872
PMM0794
Conserved hypothetical protein; Alternative locus ID: PMED4_08801.
  
    0.777
PMM1114
Conserved hypothetical protein; Alternative locus ID: PMED4_12601.
  
     0.770
PMM0502
Conserved hypothetical protein; Alternative locus ID: PMED4_05511.
  
    0.765
PMM0099
Conserved hypothetical protein; Alternative locus ID: PMED4_01041.
  
     0.760
PMM0486
Conserved hypothetical protein; Alternative locus ID: PMED4_05351.
  
     0.760
PMM0254
Conserved hypothetical protein; Alternative locus ID: PMED4_02591.
  
     0.753
PMM1161
Conserved hypothetical protein; Alternative locus ID: PMED4_13211.
  
     0.750
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
    0.747
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.745
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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