STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0415Putative L-cysteine/cystine lyase; Citation: Leibrecht and Kessler (1997) J. Biol. Chem. 272:10442-10447; Alternative locus ID: PMED4_04581. (393 aa)    
Predicted Functional Partners:
PMM0072
ABC transporter, ATP binding component; Alternative locus ID: PMED4_00741.
 
  
 0.861
PMM0416
Conserved hypothetical protein; Alternative locus ID: PMED4_04591.
  
    0.762
PMM0071
ABC transporter, membrane component; Alternative locus ID: PMED4_00731.
 
 
 0.739
PMM1052
Conserved hypothetical protein; Alternative locus ID: PMED4_11981.
  
 
 0.709
PMM0073
ABC transporter, membrane component; Alternative locus ID: PMED4_00751.
 
 
 0.680
PMM1846
Conserved hypothetical protein; Alternative locus ID: PMED4_04601.
       0.494
PMM0403
Conserved hypothetical protein; Alternative locus ID: PMED4_04441.
  
     0.441
PMM0773
Possible Geminivirus coat protein; Alternative locus ID: PMED4_08581.
   
    0.412
nusA
N utilization substance protein A; Participates in both transcription termination and antitermination.
 
     0.411
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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