Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PMM0425Conserved hypothetical protein; Alternative locus ID: PMED4_04701. (496 aa)    
Predicted Functional Partners:
PMM1360
Similar to DNA photolyase; Alternative locus ID: PMED4_15291.
 
  
 0.933
PMM0424
Conserved hypothetical protein; Alternative locus ID: PMED4_04691.
 
    0.703
PMM0120
Putative cell division inhibitor; Alternative locus ID: PMED4_01261.
      0.681
PMM0423
Conserved hypothetical protein; Alternative locus ID: PMED4_04681.
       0.593
rub
Probable rubredoxin; Alternative locus ID: PMED4_03001.
      
 0.458
tpx
Thioredoxin peroxidase; Alternative locus ID: PMED4_09521.
      
 0.458
PMM1847
Conserved hypothetical protein; Alternative locus ID: PMED4_04671.
       0.442
PMM1006
Glutathione peroxidase; Alternative locus ID: PMED4_11341; Belongs to the glutathione peroxidase family.
     
 0.440
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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