STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0449Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_04961. (338 aa)    
Predicted Functional Partners:
PMM0450
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_04971.
 
 0.998
PMM0290
Possible ABC transporter, ATP binding component; Alternative locus ID: PMED4_02951.
   
0.923
urtE
Putative ATP-binding subunit of urea ABC transport system; Citation: Valladares, A, ML Montesinos, A. Herrero, E. Flores (2002) Mol. Microbiol. 43:703-715; Alternative locus ID: PMED4_10861.
 
   
0.910
PMM0913
Possible ABC transporter; Alternative locus ID: PMED4_10241.
 
 
  
 0.850
pstB
Putative phosphate ABC transporter, ATP binding subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
   
0.817
PMM0125
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_01311.
 
   
0.748
PMM0447
Conserved hypothetical protein; Alternative locus ID: PMED4_04941.
  
  
 0.739
atpB
H+-transporting ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.735
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
   
0.728
ctaB
Putative protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
    0.727
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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